Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm12274-201ENSMUST00000120062 385 ntBASIC15.15■□□□□ 0.02
Vars2Q3U2A8 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm23105-201ENSMUST00000083719 134 ntBASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Vars2Q3U2A8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 AC130823.1-201ENSMUST00000228929 1549 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm11500-201ENSMUST00000118237 601 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm16167-201ENSMUST00000160428 1065 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm17192-201ENSMUST00000169031 511 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm18776-201ENSMUST00000188833 654 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm37638-201ENSMUST00000194337 1123 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm37826-201ENSMUST00000195329 322 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Gm30671-201ENSMUST00000214898 318 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vars2Q3U2A8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vars2Q3U2A8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vars2Q3U2A8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vars2Q3U2A8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.13■□□□□ 0.01
Vars2Q3U2A8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vars2Q3U2A8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vars2Q3U2A8 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vars2Q3U2A8 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC15.13■□□□□ 0.01
Vars2Q3U2A8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms