Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Cog3-203ENSMUST00000227473 4197 ntBASIC13.06□□□□□ -0.32
Trim43aQ3TL54 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm24196-201ENSMUST00000179161 110 ntBASIC13.05□□□□□ -0.32
Trim43aQ3TL54 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm27243-201ENSMUST00000183964 521 ntBASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm4034-201ENSMUST00000187674 480 ntBASIC13.05□□□□□ -0.32
Trim43aQ3TL54 AY702102-202ENSMUST00000194651 1173 ntBASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43aQ3TL54 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Gm12390-201ENSMUST00000117897 397 ntBASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Gm11964-201ENSMUST00000120982 444 ntBASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43aQ3TL54 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms