Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Gm25261-201ENSMUST00000157416 134 ntBASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Gm24548-201ENSMUST00000158650 108 ntBASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Gm25927-201ENSMUST00000175058 117 ntBASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Gm42937-201ENSMUST00000197360 752 ntBASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cul4aQ3TCH7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cul4aQ3TCH7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
Cul4aQ3TCH7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.9□□□□□ -0.35
Cul4aQ3TCH7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Cul4aQ3TCH7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gm12036-201ENSMUST00000120008 530 ntBASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Gm5781-201ENSMUST00000219792 443 ntBASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cul4aQ3TCH7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms