Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Dupd1-202ENSMUST00000224735 548 ntBASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccbe1Q3MI99 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccbe1Q3MI99 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms