Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Mir7032-201ENSMUST00000185154 79 ntBASIC12.51□□□□□ -0.41
Ebf1Q07802 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Spcs1-203ENSMUST00000226374 592 ntBASIC12.51□□□□□ -0.41
Ebf1Q07802 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.5□□□□□ -0.41
Ebf1Q07802 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.5□□□□□ -0.41
Ebf1Q07802 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.5□□□□□ -0.41
Ebf1Q07802 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.5□□□□□ -0.41
Ebf1Q07802 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf1Q07802 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Ebf1Q07802 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.49□□□□□ -0.41
Ebf1Q07802 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.49□□□□□ -0.41
Ebf1Q07802 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.49□□□□□ -0.41
Ebf1Q07802 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Gm14644-201ENSMUST00000116671 647 ntBASIC12.49□□□□□ -0.41
Ebf1Q07802 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.49□□□□□ -0.41
Ebf1Q07802 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.49□□□□□ -0.41
Ebf1Q07802 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.49□□□□□ -0.41
Ebf1Q07802 Gm39404-201ENSMUST00000216350 313 ntBASIC12.49□□□□□ -0.41
Ebf1Q07802 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.49□□□□□ -0.41
Ebf1Q07802 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ebf1Q07802 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf1Q07802 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms