Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm4986-201ENSMUST00000119731 549 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm14381-201ENSMUST00000122105 414 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm7809-201ENSMUST00000153199 742 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm25261-201ENSMUST00000157416 134 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Cdx4Q07424 Mospd4-201ENSMUST00000180618 576 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm27243-201ENSMUST00000183964 521 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.54□□□□□ -0.88
Cdx4Q07424 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm7783-201ENSMUST00000204795 781 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm5904-201ENSMUST00000210286 865 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.54□□□□□ -0.88
Cdx4Q07424 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.54□□□□□ -0.88
Cdx4Q07424 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.54□□□□□ -0.88
Cdx4Q07424 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cdx4Q07424 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.54□□□□□ -0.88
Cdx4Q07424 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.54□□□□□ -0.88
Cdx4Q07424 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cdx4Q07424 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.54□□□□□ -0.88
Cdx4Q07424 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx4Q07424 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Gm15370-201ENSMUST00000117158 253 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 Gm11591-201ENSMUST00000120063 702 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 Gm12363-201ENSMUST00000122250 668 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.53□□□□□ -0.88
Cdx4Q07424 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Gm27320-201ENSMUST00000184892 109 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 Cts7-204ENSMUST00000225321 1257 ntBASIC9.53□□□□□ -0.88
Cdx4Q07424 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Cdx4Q07424 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Cdx4Q07424 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx4Q07424 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms