Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.82□□□□□ -0.68
Thbs3Q05895 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm2991-201ENSMUST00000173338 480 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm27390-201ENSMUST00000184516 176 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm6621-201ENSMUST00000193251 772 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm21769-201ENSMUST00000211922 111 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm30285-201ENSMUST00000214614 422 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm26232-201ENSMUST00000083360 166 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Mir1938-201ENSMUST00000158746 100 ntBASIC10.81□□□□□ -0.68
Thbs3Q05895 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Gm27516-201ENSMUST00000184237 98 ntBASIC10.81□□□□□ -0.68
Thbs3Q05895 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.81□□□□□ -0.68
Thbs3Q05895 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.81□□□□□ -0.68
Thbs3Q05895 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Thbs3Q05895 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Paupar-201ENSMUST00000194826 3482 ntBASIC10.81□□□□□ -0.68
Thbs3Q05895 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thbs3Q05895 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.81□□□□□ -0.68
Thbs3Q05895 Cog3-203ENSMUST00000227473 4197 ntBASIC10.8□□□□□ -0.68
Thbs3Q05895 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.8□□□□□ -0.68
Thbs3Q05895 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.8□□□□□ -0.68
Thbs3Q05895 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 Gm23912-201ENSMUST00000104687 87 ntBASIC10.8□□□□□ -0.68
Thbs3Q05895 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Thbs3Q05895 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Thbs3Q05895 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thbs3Q05895 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.8□□□□□ -0.68
Thbs3Q05895 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms