Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm11952-201ENSMUST00000121172 821 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm13445-201ENSMUST00000121664 307 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm12327-201ENSMUST00000121729 1168 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm20689-201ENSMUST00000176033 279 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm27005-201ENSMUST00000182783 921 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Col9a1Q05722 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm43867-201ENSMUST00000203860 525 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm19885-201ENSMUST00000212853 343 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC12.34□□□□□ -0.43
Col9a1Q05722 AC102352.1-201ENSMUST00000224187 582 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Desi2-202ENSMUST00000069568 1193 ntBASIC12.34□□□□□ -0.43
Col9a1Q05722 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col9a1Q05722 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Col9a1Q05722 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
Col9a1Q05722 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Col9a1Q05722 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm14807-201ENSMUST00000116640 983 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm14975-201ENSMUST00000118741 664 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm12696-201ENSMUST00000122361 905 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12.33□□□□□ -0.44
Col9a1Q05722 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm25677-201ENSMUST00000174983 72 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Mir6407-201ENSMUST00000184510 101 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm33571-201ENSMUST00000193271 657 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm38233-201ENSMUST00000194259 807 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Wbp1-209ENSMUST00000205023 716 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.33□□□□□ -0.44
Col9a1Q05722 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.33□□□□□ -0.44
Col9a1Q05722 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm26448-201ENSMUST00000082446 203 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm23680-201ENSMUST00000083162 164 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Col9a1Q05722 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Gm8177-201ENSMUST00000181591 1336 ntBASIC12.33□□□□□ -0.44
Col9a1Q05722 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a1Q05722 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms