Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Npas1P97459 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.33□□□□□ -0.76
Npas1P97459 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Npas1P97459 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Npas1P97459 Gm22189-201ENSMUST00000103822 86 ntBASIC10.33□□□□□ -0.76
Npas1P97459 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.33□□□□□ -0.76
Npas1P97459 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.33□□□□□ -0.76
Npas1P97459 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Npas1P97459 Gm15321-201ENSMUST00000121290 288 ntBASIC10.33□□□□□ -0.76
Npas1P97459 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.33□□□□□ -0.76
Npas1P97459 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Npas1P97459 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Npas1P97459 Gm27838-201ENSMUST00000184829 128 ntBASIC10.33□□□□□ -0.76
Npas1P97459 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.33□□□□□ -0.76
Npas1P97459 Gm38223-201ENSMUST00000194484 695 ntBASIC10.33□□□□□ -0.76
Npas1P97459 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.33□□□□□ -0.76
Npas1P97459 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.33□□□□□ -0.76
Npas1P97459 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.33□□□□□ -0.76
Npas1P97459 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Npas1P97459 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.33□□□□□ -0.76
Npas1P97459 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.33□□□□□ -0.76
Npas1P97459 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.33□□□□□ -0.76
Npas1P97459 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Npas1P97459 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Npas1P97459 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Npas1P97459 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Npas1P97459 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Gm14719-201ENSMUST00000121891 340 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Gm24694-201ENSMUST00000180054 110 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Npas1P97459 Gm27663-201ENSMUST00000184839 110 ntBASIC10.32□□□□□ -0.76
Npas1P97459 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.32□□□□□ -0.76
Npas1P97459 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Npas1P97459 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Npas1P97459 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms