Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
PrkdcP97313 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC8.09□□□□□ -1.11
PrkdcP97313 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC8.09□□□□□ -1.11
PrkdcP97313 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
PrkdcP97313 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC8.09□□□□□ -1.12
PrkdcP97313 Gm20781-201ENSMUST00000193154 693 ntBASIC8.09□□□□□ -1.12
PrkdcP97313 Gm21736-201ENSMUST00000195399 693 ntBASIC8.09□□□□□ -1.12
PrkdcP97313 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC8.09□□□□□ -1.12
PrkdcP97313 Id2-203ENSMUST00000222667 958 ntBASIC8.09□□□□□ -1.12
PrkdcP97313 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC8.09□□□□□ -1.12
PrkdcP97313 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
PrkdcP97313 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.12
PrkdcP97313 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
PrkdcP97313 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PrkdcP97313 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PrkdcP97313 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm11475-201ENSMUST00000118482 476 ntBASIC8.08□□□□□ -1.12
PrkdcP97313 Gm4943-201ENSMUST00000132879 424 ntBASIC8.08□□□□□ -1.12
PrkdcP97313 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
PrkdcP97313 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC8.08□□□□□ -1.12
PrkdcP97313 CT030170.2-201ENSMUST00000223267 126 ntBASIC8.08□□□□□ -1.12
PrkdcP97313 CT571271.1-201ENSMUST00000227071 670 ntBASIC8.08□□□□□ -1.12
PrkdcP97313 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PrkdcP97313 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PrkdcP97313 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm43564-201ENSMUST00000196185 211 ntBASIC8.08□□□□□ -1.12
PrkdcP97313 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
PrkdcP97313 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm18642-201ENSMUST00000206642 1400 ntBASIC8.08□□□□□ -1.12
PrkdcP97313 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
PrkdcP97313 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC8.08□□□□□ -1.12
PrkdcP97313 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm15617-201ENSMUST00000118973 771 ntBASIC8.08□□□□□ -1.12
PrkdcP97313 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC8.08□□□□□ -1.12
PrkdcP97313 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC8.08□□□□□ -1.12
PrkdcP97313 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PrkdcP97313 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm37600-201ENSMUST00000193764 3292 ntBASIC8.08□□□□□ -1.12
PrkdcP97313 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PrkdcP97313 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PrkdcP97313 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Gm44323-201ENSMUST00000198689 129 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Gm45199-201ENSMUST00000207640 1507 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms