Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.68□□□□□ -0.38
Trim43bP86448 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm8805-201ENSMUST00000117848 313 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Gm14760-201ENSMUST00000121831 999 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm28693-202ENSMUST00000190758 331 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Gm37008-201ENSMUST00000195712 319 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm6007-201ENSMUST00000208170 823 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.67□□□□□ -0.38
Trim43bP86448 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43bP86448 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43bP86448 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim43bP86448 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.66□□□□□ -0.38
Trim43bP86448 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim43bP86448 Gm27572-201ENSMUST00000183702 255 ntBASIC12.66□□□□□ -0.38
Trim43bP86448 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim43bP86448 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Gm7399-201ENSMUST00000032395 858 ntBASIC12.66□□□□□ -0.38
Trim43bP86448 Mir339-201ENSMUST00000083659 96 ntBASIC12.66□□□□□ -0.38
Trim43bP86448 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.66□□□□□ -0.38
Trim43bP86448 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43bP86448 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43bP86448 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms