Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SgcaP82350 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.33□□□□□ -0.76
SgcaP82350 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.33□□□□□ -0.76
SgcaP82350 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.33□□□□□ -0.76
SgcaP82350 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.33□□□□□ -0.76
SgcaP82350 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Gm9797-201ENSMUST00000052902 613 ntBASIC10.33□□□□□ -0.76
SgcaP82350 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SgcaP82350 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.33□□□□□ -0.76
SgcaP82350 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SgcaP82350 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SgcaP82350 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
SgcaP82350 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.33□□□□□ -0.76
SgcaP82350 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SgcaP82350 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SgcaP82350 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SgcaP82350 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.33□□□□□ -0.76
SgcaP82350 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.33□□□□□ -0.76
SgcaP82350 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.33□□□□□ -0.76
SgcaP82350 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcaP82350 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.32□□□□□ -0.76
SgcaP82350 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcaP82350 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcaP82350 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcaP82350 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcaP82350 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Gm14350-201ENSMUST00000116642 640 ntBASIC10.32□□□□□ -0.76
SgcaP82350 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.32□□□□□ -0.76
SgcaP82350 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.32□□□□□ -0.76
SgcaP82350 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Gm21854-201ENSMUST00000179901 471 ntBASIC10.32□□□□□ -0.76
SgcaP82350 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcaP82350 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.32□□□□□ -0.76
SgcaP82350 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
SgcaP82350 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Mir339-201ENSMUST00000083659 96 ntBASIC10.32□□□□□ -0.76
SgcaP82350 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcaP82350 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
SgcaP82350 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcaP82350 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcaP82350 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SgcaP82350 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SgcaP82350 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Gm15371-201ENSMUST00000117057 784 ntBASIC10.31□□□□□ -0.76
SgcaP82350 Gm13223-201ENSMUST00000118609 747 ntBASIC10.31□□□□□ -0.76
SgcaP82350 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms