Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Shox2P70390 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.13□□□□□ -0.47
Shox2P70390 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shox2P70390 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.13□□□□□ -0.47
Shox2P70390 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Shox2P70390 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Shox2P70390 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Shox2P70390 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Shox2P70390 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.13□□□□□ -0.47
Shox2P70390 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.13□□□□□ -0.47
Shox2P70390 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Shox2P70390 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.13□□□□□ -0.47
Shox2P70390 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Shox2P70390 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.13□□□□□ -0.47
Shox2P70390 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.13□□□□□ -0.47
Shox2P70390 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.13□□□□□ -0.47
Shox2P70390 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shox2P70390 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shox2P70390 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.13□□□□□ -0.47
Shox2P70390 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Shox2P70390 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Shox2P70390 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shox2P70390 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Shox2P70390 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Shox2P70390 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Shox2P70390 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.12□□□□□ -0.47
Shox2P70390 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.12□□□□□ -0.47
Shox2P70390 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.12□□□□□ -0.47
Shox2P70390 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.12□□□□□ -0.47
Shox2P70390 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.12□□□□□ -0.47
Shox2P70390 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shox2P70390 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shox2P70390 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shox2P70390 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shox2P70390 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.12□□□□□ -0.47
Shox2P70390 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Shox2P70390 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms