Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.64□□□□□ -0.39
Msx3P70354 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Msx3P70354 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Msx3P70354 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Msx3P70354 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Msx3P70354 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Msx3P70354 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Msx3P70354 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Msx3P70354 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Msx3P70354 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.63□□□□□ -0.39
Msx3P70354 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.63□□□□□ -0.39
Msx3P70354 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.63□□□□□ -0.39
Msx3P70354 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.63□□□□□ -0.39
Msx3P70354 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Gm23912-201ENSMUST00000104687 87 ntBASIC12.63□□□□□ -0.39
Msx3P70354 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.63□□□□□ -0.39
Msx3P70354 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Msx3P70354 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Msx3P70354 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Msx3P70354 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.63□□□□□ -0.39
Msx3P70354 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.63□□□□□ -0.39
Msx3P70354 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.63□□□□□ -0.39
Msx3P70354 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.63□□□□□ -0.39
Msx3P70354 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx3P70354 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.63□□□□□ -0.39
Msx3P70354 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.62□□□□□ -0.39
Msx3P70354 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Msx3P70354 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Msx3P70354 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.62□□□□□ -0.39
Msx3P70354 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.62□□□□□ -0.39
Msx3P70354 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Gm23931-201ENSMUST00000103842 109 ntBASIC12.62□□□□□ -0.39
Msx3P70354 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Msx3P70354 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.62□□□□□ -0.39
Msx3P70354 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.62□□□□□ -0.39
Msx3P70354 Mospd4-201ENSMUST00000180618 576 ntBASIC12.62□□□□□ -0.39
Msx3P70354 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.62□□□□□ -0.39
Msx3P70354 Gm2546-201ENSMUST00000182630 991 ntBASIC12.62□□□□□ -0.39
Msx3P70354 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.62□□□□□ -0.39
Msx3P70354 Gm42937-201ENSMUST00000197360 752 ntBASIC12.62□□□□□ -0.39
Msx3P70354 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.62□□□□□ -0.39
Msx3P70354 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms