Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.53□□□□□ -0.56
Six5P70178 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Six5P70178 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Six5P70178 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.53□□□□□ -0.56
Six5P70178 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Six5P70178 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.53□□□□□ -0.56
Six5P70178 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Six5P70178 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six5P70178 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Six5P70178 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Six5P70178 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.52□□□□□ -0.56
Six5P70178 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Six5P70178 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Six5P70178 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Six5P70178 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six5P70178 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Six5P70178 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Six5P70178 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Gm25214-201ENSMUST00000104573 129 ntBASIC11.52□□□□□ -0.57
Six5P70178 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Six5P70178 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.52□□□□□ -0.57
Six5P70178 Gm14832-201ENSMUST00000121289 322 ntBASIC11.52□□□□□ -0.57
Six5P70178 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.52□□□□□ -0.57
Six5P70178 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Gm42937-201ENSMUST00000197360 752 ntBASIC11.52□□□□□ -0.57
Six5P70178 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.52□□□□□ -0.57
Six5P70178 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.52□□□□□ -0.57
Six5P70178 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.52□□□□□ -0.57
Six5P70178 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.52□□□□□ -0.57
Six5P70178 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Six5P70178 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Six5P70178 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Six5P70178 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.52□□□□□ -0.57
Six5P70178 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Six5P70178 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Six5P70178 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Six5P70178 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.51□□□□□ -0.57
Six5P70178 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Six5P70178 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.51□□□□□ -0.57
Six5P70178 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.51□□□□□ -0.57
Six5P70178 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Gm24830-201ENSMUST00000102024 166 ntBASIC11.51□□□□□ -0.57
Six5P70178 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Six5P70178 Gm14726-201ENSMUST00000120623 896 ntBASIC11.51□□□□□ -0.57
Six5P70178 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Six5P70178 Gm4034-201ENSMUST00000187674 480 ntBASIC11.51□□□□□ -0.57
Six5P70178 Gm38266-201ENSMUST00000194931 421 ntBASIC11.51□□□□□ -0.57
Six5P70178 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.51□□□□□ -0.57
Six5P70178 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.51□□□□□ -0.57
Six5P70178 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Gm26232-201ENSMUST00000083360 166 ntBASIC11.51□□□□□ -0.57
Six5P70178 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.51□□□□□ -0.57
Six5P70178 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Six5P70178 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six5P70178 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Six5P70178 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms