Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lrch1P62046 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lrch1P62046 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lrch1P62046 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.48□□□□□ -0.09
Lrch1P62046 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lrch1P62046 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lrch1P62046 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.47□□□□□ -0.09
Lrch1P62046 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lrch1P62046 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lrch1P62046 Gm11836-201ENSMUST00000121022 441 ntBASIC14.47□□□□□ -0.09
Lrch1P62046 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.47□□□□□ -0.09
Lrch1P62046 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.47□□□□□ -0.09
Lrch1P62046 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Gm8531-201ENSMUST00000188319 893 ntBASIC14.47□□□□□ -0.09
Lrch1P62046 Gm29499-201ENSMUST00000189151 486 ntBASIC14.47□□□□□ -0.09
Lrch1P62046 Gm28329-201ENSMUST00000191208 689 ntBASIC14.47□□□□□ -0.09
Lrch1P62046 Gm29171-201ENSMUST00000191397 486 ntBASIC14.47□□□□□ -0.09
Lrch1P62046 Gm18711-201ENSMUST00000199341 750 ntBASIC14.47□□□□□ -0.09
Lrch1P62046 Gm45594-201ENSMUST00000211717 241 ntBASIC14.47□□□□□ -0.09
Lrch1P62046 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lrch1P62046 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lrch1P62046 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lrch1P62046 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lrch1P62046 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lrch1P62046 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.47□□□□□ -0.09
Lrch1P62046 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.46□□□□□ -0.09
Lrch1P62046 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Lrch1P62046 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.46□□□□□ -0.09
Lrch1P62046 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Lrch1P62046 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Lrch1P62046 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Gm16166-201ENSMUST00000118291 787 ntBASIC14.46□□□□□ -0.09
Lrch1P62046 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.46□□□□□ -0.09
Lrch1P62046 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.46□□□□□ -0.09
Lrch1P62046 Gm35713-201ENSMUST00000210516 199 ntBASIC14.46□□□□□ -0.09
Lrch1P62046 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.46□□□□□ -0.09
Lrch1P62046 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.46□□□□□ -0.09
Lrch1P62046 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.46□□□□□ -0.09
Lrch1P62046 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.46□□□□□ -0.09
Lrch1P62046 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.46□□□□□ -0.09
Lrch1P62046 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrch1P62046 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Lrch1P62046 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lrch1P62046 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.46□□□□□ -0.1
Lrch1P62046 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrch1P62046 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrch1P62046 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.45□□□□□ -0.1
Lrch1P62046 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.45□□□□□ -0.1
Lrch1P62046 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrch1P62046 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lrch1P62046 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Lrch1P62046 Gm25076-201ENSMUST00000104098 132 ntBASIC14.45□□□□□ -0.1
Lrch1P62046 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Gm12164-201ENSMUST00000121695 551 ntBASIC14.45□□□□□ -0.1
Lrch1P62046 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.45□□□□□ -0.1
Lrch1P62046 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.45□□□□□ -0.1
Lrch1P62046 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrch1P62046 Mir6923-201ENSMUST00000184592 72 ntBASIC14.45□□□□□ -0.1
Lrch1P62046 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14.45□□□□□ -0.1
Lrch1P62046 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms