Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Gm6903-201ENSMUST00000160509 1366 ntBASIC16.5■□□□□ 0.23
Nphp4P59240 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Nphp4P59240 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.5■□□□□ 0.23
Nphp4P59240 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Nphp4P59240 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Gm22920-201ENSMUST00000102175 109 ntBASIC16.5■□□□□ 0.23
Nphp4P59240 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nphp4P59240 Gm12029-201ENSMUST00000120073 832 ntBASIC16.5■□□□□ 0.23
Nphp4P59240 Gm13328-201ENSMUST00000120816 1020 ntBASIC16.5■□□□□ 0.23
Nphp4P59240 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nphp4P59240 Gm5852-201ENSMUST00000194119 1021 ntBASIC16.5■□□□□ 0.23
Nphp4P59240 Gm9463-201ENSMUST00000206707 601 ntBASIC16.5■□□□□ 0.23
Nphp4P59240 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC16.5■□□□□ 0.23
Nphp4P59240 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nphp4P59240 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.49■□□□□ 0.23
Nphp4P59240 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC16.49■□□□□ 0.23
Nphp4P59240 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nphp4P59240 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC16.49■□□□□ 0.23
Nphp4P59240 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC16.49■□□□□ 0.23
Nphp4P59240 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC16.49■□□□□ 0.23
Nphp4P59240 Gm27390-201ENSMUST00000184516 176 ntBASIC16.49■□□□□ 0.23
Nphp4P59240 Ighv5-11-201ENSMUST00000193354 371 ntBASIC16.49■□□□□ 0.23
Nphp4P59240 Gm44980-201ENSMUST00000205826 314 ntBASIC16.49■□□□□ 0.23
Nphp4P59240 Gm45398-201ENSMUST00000210561 165 ntBASIC16.49■□□□□ 0.23
Nphp4P59240 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.49■□□□□ 0.23
Nphp4P59240 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.49■□□□□ 0.23
Nphp4P59240 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nphp4P59240 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC16.49■□□□□ 0.23
Nphp4P59240 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nphp4P59240 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.49■□□□□ 0.23
Nphp4P59240 Gm18983-201ENSMUST00000222884 2729 ntBASIC16.49■□□□□ 0.23
Nphp4P59240 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nphp4P59240 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm12856-201ENSMUST00000119471 1293 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm18367-201ENSMUST00000176139 600 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm21092-201ENSMUST00000178995 955 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm28937-201ENSMUST00000185413 695 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm29400-201ENSMUST00000187208 695 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm28662-201ENSMUST00000188446 695 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm28251-201ENSMUST00000188835 695 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm37318-201ENSMUST00000194325 695 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm38017-201ENSMUST00000194768 695 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm37287-201ENSMUST00000195449 695 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm37793-201ENSMUST00000195548 695 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm6450-201ENSMUST00000200896 574 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Gm45550-201ENSMUST00000209380 946 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 AC153505.1-201ENSMUST00000218819 1071 ntBASIC16.48■□□□□ 0.23
Nphp4P59240 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nphp4P59240 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Nphp4P59240 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nphp4P59240 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nphp4P59240 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms