Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Nup43P59235 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.63□□□□□ -0.55
Nup43P59235 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.63□□□□□ -0.55
Nup43P59235 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.63□□□□□ -0.55
Nup43P59235 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.63□□□□□ -0.55
Nup43P59235 Gm10312-201ENSMUST00000078515 489 ntBASIC11.63□□□□□ -0.55
Nup43P59235 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Nup43P59235 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.63□□□□□ -0.55
Nup43P59235 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.63□□□□□ -0.55
Nup43P59235 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nup43P59235 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nup43P59235 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.62□□□□□ -0.55
Nup43P59235 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.62□□□□□ -0.55
Nup43P59235 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.62□□□□□ -0.55
Nup43P59235 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Gm20482-202ENSMUST00000174729 825 ntBASIC11.62□□□□□ -0.55
Nup43P59235 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Gm27046-201ENSMUST00000182160 463 ntBASIC11.62□□□□□ -0.55
Nup43P59235 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.62□□□□□ -0.55
Nup43P59235 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Nup43P59235 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.62□□□□□ -0.55
Nup43P59235 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.62□□□□□ -0.55
Nup43P59235 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.62□□□□□ -0.55
Nup43P59235 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.62□□□□□ -0.55
Nup43P59235 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nup43P59235 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup43P59235 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nup43P59235 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.61□□□□□ -0.55
Nup43P59235 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nup43P59235 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Nup43P59235 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Gm24830-201ENSMUST00000102024 166 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Gm13350-201ENSMUST00000120519 479 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nup43P59235 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.61□□□□□ -0.55
Nup43P59235 Gm27320-201ENSMUST00000184892 109 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms