Protein–RNA interactions for Protein: P54728

Rad23b, UV excision repair protein RAD23 homolog B, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad23bP54728 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Gm13916-201ENSMUST00000117368 628 ntBASIC15.22■□□□□ 0.03
Rad23bP54728 Gm14034-201ENSMUST00000120147 551 ntBASIC15.22■□□□□ 0.03
Rad23bP54728 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC15.22■□□□□ 0.03
Rad23bP54728 Gm23045-201ENSMUST00000175041 96 ntBASIC15.22■□□□□ 0.03
Rad23bP54728 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC15.22■□□□□ 0.03
Rad23bP54728 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC15.22■□□□□ 0.03
Rad23bP54728 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.22■□□□□ 0.03
Rad23bP54728 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.22■□□□□ 0.03
Rad23bP54728 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.22■□□□□ 0.03
Rad23bP54728 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.22■□□□□ 0.03
Rad23bP54728 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rad23bP54728 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rad23bP54728 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rad23bP54728 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rad23bP54728 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.21■□□□□ 0.03
Rad23bP54728 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Rad23bP54728 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rad23bP54728 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rad23bP54728 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Rad23bP54728 Gm8737-201ENSMUST00000122208 642 ntBASIC15.21■□□□□ 0.03
Rad23bP54728 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.21■□□□□ 0.03
Rad23bP54728 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Gm25998-201ENSMUST00000175397 53 ntBASIC15.21■□□□□ 0.03
Rad23bP54728 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC15.21■□□□□ 0.03
Rad23bP54728 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.21■□□□□ 0.03
Rad23bP54728 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC15.21■□□□□ 0.03
Rad23bP54728 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rad23bP54728 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Rad23bP54728 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.21■□□□□ 0.03
Rad23bP54728 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rad23bP54728 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.21■□□□□ 0.03
Rad23bP54728 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rad23bP54728 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rad23bP54728 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rad23bP54728 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rad23bP54728 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rad23bP54728 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rad23bP54728 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.2■□□□□ 0.02
Rad23bP54728 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rad23bP54728 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Rad23bP54728 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC15.2■□□□□ 0.02
Rad23bP54728 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rad23bP54728 Gm13019-201ENSMUST00000120000 276 ntBASIC15.2■□□□□ 0.02
Rad23bP54728 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.2■□□□□ 0.02
Rad23bP54728 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rad23bP54728 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Ap3s1-202ENSMUST00000224622 978 ntBASIC15.2■□□□□ 0.02
Rad23bP54728 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC15.2■□□□□ 0.02
Rad23bP54728 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rad23bP54728 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rad23bP54728 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rad23bP54728 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rad23bP54728 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rad23bP54728 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.19■□□□□ 0.02
Rad23bP54728 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rad23bP54728 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms