Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Fdft1P53798 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Fdft1P53798 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Fdft1P53798 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Fdft1P53798 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Fdft1P53798 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.31□□□□□ -0.44
Fdft1P53798 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Fdft1P53798 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Fdft1P53798 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Fdft1P53798 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.31□□□□□ -0.44
Fdft1P53798 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.31□□□□□ -0.44
Fdft1P53798 Gm11964-201ENSMUST00000120982 444 ntBASIC12.31□□□□□ -0.44
Fdft1P53798 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.31□□□□□ -0.44
Fdft1P53798 Mir1982-201ENSMUST00000157368 74 ntBASIC12.31□□□□□ -0.44
Fdft1P53798 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.31□□□□□ -0.44
Fdft1P53798 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Gm3890-201ENSMUST00000182416 207 ntBASIC12.31□□□□□ -0.44
Fdft1P53798 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.31□□□□□ -0.44
Fdft1P53798 Gm43433-201ENSMUST00000196573 481 ntBASIC12.31□□□□□ -0.44
Fdft1P53798 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Fdft1P53798 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.31□□□□□ -0.44
Fdft1P53798 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Gm22058-201ENSMUST00000083393 310 ntBASIC12.31□□□□□ -0.44
Fdft1P53798 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.31□□□□□ -0.44
Fdft1P53798 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Fdft1P53798 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.31□□□□□ -0.44
Fdft1P53798 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fdft1P53798 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Fdft1P53798 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Fdft1P53798 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.3□□□□□ -0.44
Fdft1P53798 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.3□□□□□ -0.44
Fdft1P53798 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.3□□□□□ -0.44
Fdft1P53798 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.3□□□□□ -0.44
Fdft1P53798 Gm16379-201ENSMUST00000161469 348 ntBASIC12.3□□□□□ -0.44
Fdft1P53798 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.3□□□□□ -0.44
Fdft1P53798 Gm8762-201ENSMUST00000193486 339 ntBASIC12.3□□□□□ -0.44
Fdft1P53798 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.3□□□□□ -0.44
Fdft1P53798 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.3□□□□□ -0.44
Fdft1P53798 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.3□□□□□ -0.44
Fdft1P53798 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms