Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TubP50586 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TubP50586 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TubP50586 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TubP50586 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.61□□□□□ -0.39
TubP50586 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TubP50586 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.61□□□□□ -0.39
TubP50586 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.61□□□□□ -0.39
TubP50586 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Gm25668-201ENSMUST00000157700 129 ntBASIC12.61□□□□□ -0.39
TubP50586 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.61□□□□□ -0.39
TubP50586 Gm8885-201ENSMUST00000189382 598 ntBASIC12.61□□□□□ -0.39
TubP50586 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Gm6082-201ENSMUST00000215204 454 ntBASIC12.61□□□□□ -0.39
TubP50586 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.61□□□□□ -0.39
TubP50586 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Gm9996-201ENSMUST00000070359 913 ntBASIC12.61□□□□□ -0.39
TubP50586 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
TubP50586 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
TubP50586 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
TubP50586 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.61□□□□□ -0.39
TubP50586 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.61□□□□□ -0.39
TubP50586 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TubP50586 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TubP50586 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TubP50586 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.6□□□□□ -0.39
TubP50586 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.6□□□□□ -0.39
TubP50586 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Gm24830-201ENSMUST00000102024 166 ntBASIC12.6□□□□□ -0.39
TubP50586 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TubP50586 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.6□□□□□ -0.39
TubP50586 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Gm5070-201ENSMUST00000177599 862 ntBASIC12.6□□□□□ -0.39
TubP50586 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.6□□□□□ -0.39
TubP50586 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.6□□□□□ -0.39
TubP50586 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Gm26232-201ENSMUST00000083360 166 ntBASIC12.6□□□□□ -0.39
TubP50586 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.6□□□□□ -0.39
TubP50586 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TubP50586 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.6□□□□□ -0.39
TubP50586 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Pck2-205ENSMUST00000226352 2784 ntBASIC12.6□□□□□ -0.39
TubP50586 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.6□□□□□ -0.39
TubP50586 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TubP50586 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.6□□□□□ -0.39
TubP50586 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TubP50586 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
TubP50586 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms