Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.62□□□□□ -0.07
Ercc3P49135 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ercc3P49135 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.62□□□□□ -0.07
Ercc3P49135 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.62□□□□□ -0.07
Ercc3P49135 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.62□□□□□ -0.07
Ercc3P49135 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Cog3-203ENSMUST00000227473 4197 ntBASIC14.62□□□□□ -0.07
Ercc3P49135 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ercc3P49135 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc3P49135 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ercc3P49135 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.61□□□□□ -0.07
Ercc3P49135 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ercc3P49135 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.61□□□□□ -0.07
Ercc3P49135 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ercc3P49135 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Gm15547-201ENSMUST00000122152 333 ntBASIC14.61□□□□□ -0.07
Ercc3P49135 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.61□□□□□ -0.07
Ercc3P49135 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.61□□□□□ -0.07
Ercc3P49135 Gm20482-202ENSMUST00000174729 825 ntBASIC14.61□□□□□ -0.07
Ercc3P49135 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.61□□□□□ -0.07
Ercc3P49135 Gm45224-201ENSMUST00000208203 414 ntBASIC14.61□□□□□ -0.07
Ercc3P49135 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ercc3P49135 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ercc3P49135 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ercc3P49135 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.61□□□□□ -0.07
Ercc3P49135 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc3P49135 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.6□□□□□ -0.07
Ercc3P49135 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.6□□□□□ -0.07
Ercc3P49135 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.6□□□□□ -0.07
Ercc3P49135 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Ercc3P49135 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.6□□□□□ -0.07
Ercc3P49135 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.6□□□□□ -0.07
Ercc3P49135 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.6□□□□□ -0.07
Ercc3P49135 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ercc3P49135 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc3P49135 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.6□□□□□ -0.07
Ercc3P49135 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc3P49135 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Ercc3P49135 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc3P49135 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms