Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdx2P43241 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm9797-202ENSMUST00000218003 294 ntBASIC11.68□□□□□ -0.54
Cdx2P43241 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.68□□□□□ -0.54
Cdx2P43241 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdx2P43241 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.68□□□□□ -0.54
Cdx2P43241 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cdx2P43241 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdx2P43241 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cdx2P43241 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdx2P43241 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdx2P43241 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdx2P43241 Gm12795-201ENSMUST00000117594 539 ntBASIC11.67□□□□□ -0.54
Cdx2P43241 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdx2P43241 Gm14585-201ENSMUST00000120713 634 ntBASIC11.67□□□□□ -0.54
Cdx2P43241 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Gm38210-201ENSMUST00000191944 809 ntBASIC11.67□□□□□ -0.54
Cdx2P43241 Gm18711-201ENSMUST00000199341 750 ntBASIC11.67□□□□□ -0.54
Cdx2P43241 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdx2P43241 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdx2P43241 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.67□□□□□ -0.54
Cdx2P43241 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.67□□□□□ -0.54
Cdx2P43241 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdx2P43241 Snora73b-201ENSMUST00000083419 205 ntBASIC11.67□□□□□ -0.54
Cdx2P43241 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdx2P43241 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdx2P43241 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdx2P43241 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.67□□□□□ -0.54
Cdx2P43241 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.67□□□□□ -0.54
Cdx2P43241 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cdx2P43241 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdx2P43241 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdx2P43241 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx2P43241 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdx2P43241 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.66□□□□□ -0.54
Cdx2P43241 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdx2P43241 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdx2P43241 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm11246-201ENSMUST00000120880 345 ntBASIC11.66□□□□□ -0.54
Cdx2P43241 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Cdx2P43241 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm34023-201ENSMUST00000195539 217 ntBASIC11.66□□□□□ -0.54
Cdx2P43241 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm8956-201ENSMUST00000203939 825 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms