Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Gm10268-201ENSMUST00000085340 555 ntBASIC11.58□□□□□ -0.56
Sox6P40645 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.58□□□□□ -0.56
Sox6P40645 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox6P40645 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.58□□□□□ -0.56
Sox6P40645 Cog3-203ENSMUST00000227473 4197 ntBASIC11.58□□□□□ -0.56
Sox6P40645 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Sox6P40645 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sox6P40645 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gm14127-201ENSMUST00000117906 678 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Gm11425-201ENSMUST00000119608 498 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Gm1335-201ENSMUST00000121653 386 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.57□□□□□ -0.56
Sox6P40645 Gm27731-201ENSMUST00000185192 107 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.57□□□□□ -0.56
Sox6P40645 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sox6P40645 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gm9396-201ENSMUST00000076703 567 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.57□□□□□ -0.56
Sox6P40645 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sox6P40645 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sox6P40645 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox6P40645 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sox6P40645 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sox6P40645 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sox6P40645 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Sox6P40645 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox6P40645 Gm13226-201ENSMUST00000117838 404 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox6P40645 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox6P40645 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox6P40645 Gm17208-201ENSMUST00000168388 535 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Gm26927-201ENSMUST00000182385 965 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Gm27390-201ENSMUST00000184516 176 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Gm37042-201ENSMUST00000193816 581 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox6P40645 Gm4768-201ENSMUST00000206199 686 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.56□□□□□ -0.56
Sox6P40645 Gm19163-201ENSMUST00000223313 780 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.56□□□□□ -0.56
Sox6P40645 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms