Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC18.01■□□□□ 0.47
Chd1P40201 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Gm12986-201ENSMUST00000119037 967 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Gm8019-201ENSMUST00000119317 587 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Gm14165-201ENSMUST00000121456 952 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC18.01■□□□□ 0.47
Chd1P40201 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Chd1P40201 Gm43997-201ENSMUST00000203986 1005 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Gm44814-201ENSMUST00000207018 434 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Gm42863-201ENSMUST00000197875 2958 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chd1P40201 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC18.01■□□□□ 0.47
Chd1P40201 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Gm13284-201ENSMUST00000121020 547 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC18.01■□□□□ 0.47
Chd1P40201 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC18.01■□□□□ 0.47
Chd1P40201 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC18.01■□□□□ 0.47
Chd1P40201 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC18.01■□□□□ 0.47
Chd1P40201 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Chd1P40201 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chd1P40201 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Gm23745-201ENSMUST00000104230 125 ntBASIC18■□□□□ 0.47
Chd1P40201 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC18■□□□□ 0.47
Chd1P40201 Gm4868-201ENSMUST00000164138 789 ntBASIC18■□□□□ 0.47
Chd1P40201 Gm9625-201ENSMUST00000180422 955 ntBASIC18■□□□□ 0.47
Chd1P40201 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC18■□□□□ 0.47
Chd1P40201 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
Chd1P40201 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC18■□□□□ 0.47
Chd1P40201 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1P40201 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chd1P40201 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC17.99■□□□□ 0.47
Chd1P40201 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Gm1826-201ENSMUST00000118646 1162 ntBASIC17.99■□□□□ 0.47
Chd1P40201 Gm15136-201ENSMUST00000120552 533 ntBASIC17.99■□□□□ 0.47
Chd1P40201 Gm22344-201ENSMUST00000122642 278 ntBASIC17.99■□□□□ 0.47
Chd1P40201 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC17.99■□□□□ 0.47
Chd1P40201 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC17.99■□□□□ 0.47
Chd1P40201 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC17.99■□□□□ 0.47
Chd1P40201 Gm6216-201ENSMUST00000182390 687 ntBASIC17.99■□□□□ 0.47
Chd1P40201 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chd1P40201 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Gm45266-201ENSMUST00000210111 2173 ntBASIC17.99■□□□□ 0.47
Chd1P40201 Sybu-209ENSMUST00000228639 4113 ntBASIC17.99■□□□□ 0.47
Chd1P40201 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Gm37600-201ENSMUST00000193764 3292 ntBASIC17.99■□□□□ 0.47
Chd1P40201 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1P40201 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Chd1P40201 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Gm12912-201ENSMUST00000121596 1381 ntBASIC17.98■□□□□ 0.47
Chd1P40201 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Gm14441-201ENSMUST00000121960 540 ntBASIC17.98■□□□□ 0.47
Chd1P40201 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC17.98■□□□□ 0.47
Chd1P40201 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC17.98■□□□□ 0.47
Chd1P40201 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC17.98■□□□□ 0.47
Chd1P40201 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC17.98■□□□□ 0.47
Chd1P40201 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Chd1P40201 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Chd1P40201 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms