Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 AC154361.2-201ENSMUST00000224747 943 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PtprkP35822 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Map1b-203ENSMUST00000223725 2669 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PtprkP35822 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PtprkP35822 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC19.22■□□□□ 0.67
PtprkP35822 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC19.22■□□□□ 0.67
PtprkP35822 Gm37861-201ENSMUST00000193534 2869 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Gm11502-201ENSMUST00000120917 1211 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC19.22■□□□□ 0.67
PtprkP35822 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PtprkP35822 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PtprkP35822 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Gm9135-201ENSMUST00000182963 990 ntBASIC19.22■□□□□ 0.67
PtprkP35822 AC129308.3-201ENSMUST00000225652 524 ntBASIC19.22■□□□□ 0.67
PtprkP35822 AC165154.1-201ENSMUST00000226661 340 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Acot6-202ENSMUST00000222921 3622 ntBASIC19.21■□□□□ 0.67
PtprkP35822 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC19.21■□□□□ 0.67
PtprkP35822 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PtprkP35822 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PtprkP35822 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC19.21■□□□□ 0.67
PtprkP35822 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Gm14034-201ENSMUST00000120147 551 ntBASIC19.21■□□□□ 0.67
PtprkP35822 Gm12453-201ENSMUST00000121981 331 ntBASIC19.21■□□□□ 0.67
PtprkP35822 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PtprkP35822 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC19.21■□□□□ 0.67
PtprkP35822 AC164087.2-201ENSMUST00000216206 1072 ntBASIC19.21■□□□□ 0.67
PtprkP35822 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PtprkP35822 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PtprkP35822 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PtprkP35822 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PtprkP35822 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PtprkP35822 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PtprkP35822 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Gm20414-201ENSMUST00000172918 646 ntBASIC19.2■□□□□ 0.66
PtprkP35822 Gm42433-201ENSMUST00000196806 940 ntBASIC19.2■□□□□ 0.66
PtprkP35822 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PtprkP35822 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Gm37437-201ENSMUST00000194451 1937 ntBASIC19.19■□□□□ 0.66
PtprkP35822 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Gm11783-201ENSMUST00000119549 885 ntBASIC19.19■□□□□ 0.66
PtprkP35822 Gm15610-201ENSMUST00000120584 195 ntBASIC19.19■□□□□ 0.66
PtprkP35822 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC19.19■□□□□ 0.66
PtprkP35822 Gm45135-201ENSMUST00000206787 1184 ntBASIC19.19■□□□□ 0.66
PtprkP35822 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PtprkP35822 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PtprkP35822 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PtprkP35822 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms