Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rfc1P35601 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rfc1P35601 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rfc1P35601 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.98□□□□□ -0.33
Rfc1P35601 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rfc1P35601 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.97□□□□□ -0.33
Rfc1P35601 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.97□□□□□ -0.33
Rfc1P35601 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rfc1P35601 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.97□□□□□ -0.33
Rfc1P35601 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfc1P35601 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.97□□□□□ -0.33
Rfc1P35601 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.97□□□□□ -0.33
Rfc1P35601 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.97□□□□□ -0.33
Rfc1P35601 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Rfc1P35601 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rfc1P35601 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.97□□□□□ -0.33
Rfc1P35601 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfc1P35601 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.97□□□□□ -0.33
Rfc1P35601 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Rfc1P35601 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rfc1P35601 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rfc1P35601 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfc1P35601 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfc1P35601 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Rfc1P35601 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.96□□□□□ -0.33
Rfc1P35601 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfc1P35601 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Rfc1P35601 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Mir686-201ENSMUST00000102174 109 ntBASIC12.96□□□□□ -0.33
Rfc1P35601 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Gm15371-201ENSMUST00000117057 784 ntBASIC12.96□□□□□ -0.33
Rfc1P35601 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Rfc1P35601 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Gm5866-201ENSMUST00000177881 973 ntBASIC12.96□□□□□ -0.33
Rfc1P35601 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rfc1P35601 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.96□□□□□ -0.33
Rfc1P35601 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.96□□□□□ -0.33
Rfc1P35601 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfc1P35601 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.96□□□□□ -0.33
Rfc1P35601 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfc1P35601 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rfc1P35601 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfc1P35601 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfc1P35601 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Rfc1P35601 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfc1P35601 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rfc1P35601 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfc1P35601 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfc1P35601 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rfc1P35601 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfc1P35601 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfc1P35601 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms