Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm24231-201ENSMUST00000104315 133 ntBASIC11.36□□□□□ -0.59
Sftpa1P35242 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm14724-201ENSMUST00000118400 537 ntBASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm12899-201ENSMUST00000120565 551 ntBASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm14585-201ENSMUST00000120713 634 ntBASIC11.36□□□□□ -0.59
Sftpa1P35242 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.36□□□□□ -0.59
Sftpa1P35242 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm17831-201ENSMUST00000205579 900 ntBASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm4157-201ENSMUST00000211647 679 ntBASIC11.36□□□□□ -0.59
Sftpa1P35242 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.36□□□□□ -0.59
Sftpa1P35242 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.36□□□□□ -0.59
Sftpa1P35242 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.36□□□□□ -0.59
Sftpa1P35242 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.36□□□□□ -0.59
Sftpa1P35242 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sftpa1P35242 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sftpa1P35242 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm23119-201ENSMUST00000158610 140 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm23771-201ENSMUST00000178702 110 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Mir6998-201ENSMUST00000183343 64 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Mir7076-201ENSMUST00000183519 74 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm27910-201ENSMUST00000185004 107 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.35□□□□□ -0.59
Sftpa1P35242 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm2965-201ENSMUST00000198365 343 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.35□□□□□ -0.59
Sftpa1P35242 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.35□□□□□ -0.59
Sftpa1P35242 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sftpa1P35242 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sftpa1P35242 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms