Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm44346-201ENSMUST00000198851 141 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Nedd8P29595 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Nedd8P29595 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Nedd8P29595 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.32□□□□□ -0.6
Nedd8P29595 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.32□□□□□ -0.6
Nedd8P29595 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Nedd8P29595 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.32□□□□□ -0.6
Nedd8P29595 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nedd8P29595 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.32□□□□□ -0.6
Nedd8P29595 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
Nedd8P29595 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.32□□□□□ -0.6
Nedd8P29595 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.32□□□□□ -0.6
Nedd8P29595 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nedd8P29595 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nedd8P29595 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.32□□□□□ -0.6
Nedd8P29595 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nedd8P29595 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nedd8P29595 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.32□□□□□ -0.6
Nedd8P29595 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nedd8P29595 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.31□□□□□ -0.6
Nedd8P29595 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Nedd8P29595 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.31□□□□□ -0.6
Nedd8P29595 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Nedd8P29595 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nedd8P29595 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nedd8P29595 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms