Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.42□□□□□ -0.58
Cd40lgP27548 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.41□□□□□ -0.58
Cd40lgP27548 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gm15370-201ENSMUST00000117158 253 ntBASIC11.41□□□□□ -0.58
Cd40lgP27548 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.41□□□□□ -0.58
Cd40lgP27548 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.41□□□□□ -0.58
Cd40lgP27548 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gm43822-201ENSMUST00000200285 476 ntBASIC11.41□□□□□ -0.58
Cd40lgP27548 Olfr284-202ENSMUST00000206647 966 ntBASIC11.41□□□□□ -0.58
Cd40lgP27548 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.41□□□□□ -0.58
Cd40lgP27548 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.41□□□□□ -0.58
Cd40lgP27548 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.41□□□□□ -0.58
Cd40lgP27548 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cd40lgP27548 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.4□□□□□ -0.58
Cd40lgP27548 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd40lgP27548 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cd40lgP27548 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cd40lgP27548 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cd40lgP27548 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cd40lgP27548 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cd40lgP27548 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cd40lgP27548 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cd40lgP27548 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms