Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.68□□□□□ -0.38
Nfkb1P25799 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.67□□□□□ -0.38
Nfkb1P25799 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.67□□□□□ -0.38
Nfkb1P25799 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.67□□□□□ -0.38
Nfkb1P25799 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.67□□□□□ -0.38
Nfkb1P25799 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gm14760-201ENSMUST00000121831 999 ntBASIC12.67□□□□□ -0.38
Nfkb1P25799 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nfkb1P25799 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gm26035-201ENSMUST00000083065 308 ntBASIC12.67□□□□□ -0.38
Nfkb1P25799 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.67□□□□□ -0.38
Nfkb1P25799 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nfkb1P25799 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Nfkb1P25799 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Gm3786-201ENSMUST00000202659 378 ntBASIC12.66□□□□□ -0.38
Nfkb1P25799 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nfkb1P25799 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nfkb1P25799 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm29615-201ENSMUST00000185371 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm28224-201ENSMUST00000186078 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm29001-201ENSMUST00000186177 697 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms