Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clk1P22518 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.57□□□□□ -0.56
Clk1P22518 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.57□□□□□ -0.56
Clk1P22518 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.57□□□□□ -0.56
Clk1P22518 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.56□□□□□ -0.56
Clk1P22518 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.56□□□□□ -0.56
Clk1P22518 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 Mir1982-201ENSMUST00000157368 74 ntBASIC11.56□□□□□ -0.56
Clk1P22518 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Gm18584-201ENSMUST00000203098 964 ntBASIC11.56□□□□□ -0.56
Clk1P22518 Gm18062-201ENSMUST00000208020 547 ntBASIC11.56□□□□□ -0.56
Clk1P22518 Gm18055-201ENSMUST00000208254 547 ntBASIC11.56□□□□□ -0.56
Clk1P22518 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.56□□□□□ -0.56
Clk1P22518 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Clk1P22518 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clk1P22518 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clk1P22518 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.56□□□□□ -0.56
Clk1P22518 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.56□□□□□ -0.56
Clk1P22518 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Clk1P22518 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clk1P22518 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.55□□□□□ -0.56
Clk1P22518 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.55□□□□□ -0.56
Clk1P22518 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.55□□□□□ -0.56
Clk1P22518 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.55□□□□□ -0.56
Clk1P22518 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.55□□□□□ -0.56
Clk1P22518 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.55□□□□□ -0.56
Clk1P22518 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.55□□□□□ -0.56
Clk1P22518 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Clk1P22518 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Clk1P22518 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Gm15703-201ENSMUST00000120250 880 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms