Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
BdnfP21237 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
BdnfP21237 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
BdnfP21237 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BdnfP21237 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.84□□□□□ -0.51
BdnfP21237 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Gm24231-201ENSMUST00000104315 133 ntBASIC11.84□□□□□ -0.51
BdnfP21237 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.84□□□□□ -0.51
BdnfP21237 Gm11637-201ENSMUST00000120601 592 ntBASIC11.84□□□□□ -0.51
BdnfP21237 Gm12363-201ENSMUST00000122250 668 ntBASIC11.84□□□□□ -0.51
BdnfP21237 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Gm27847-201ENSMUST00000183711 107 ntBASIC11.84□□□□□ -0.51
BdnfP21237 Gm27375-201ENSMUST00000183799 107 ntBASIC11.84□□□□□ -0.51
BdnfP21237 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.84□□□□□ -0.51
BdnfP21237 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.84□□□□□ -0.51
BdnfP21237 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.84□□□□□ -0.51
BdnfP21237 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
BdnfP21237 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
BdnfP21237 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.84□□□□□ -0.51
BdnfP21237 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BdnfP21237 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
BdnfP21237 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
BdnfP21237 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
BdnfP21237 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.83□□□□□ -0.52
BdnfP21237 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BdnfP21237 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.83□□□□□ -0.52
BdnfP21237 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.83□□□□□ -0.52
BdnfP21237 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.83□□□□□ -0.52
BdnfP21237 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BdnfP21237 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.83□□□□□ -0.52
BdnfP21237 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
BdnfP21237 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.83□□□□□ -0.52
BdnfP21237 Gm24644-201ENSMUST00000157114 139 ntBASIC11.83□□□□□ -0.52
BdnfP21237 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.83□□□□□ -0.52
BdnfP21237 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.83□□□□□ -0.52
BdnfP21237 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.83□□□□□ -0.52
BdnfP21237 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.83□□□□□ -0.52
BdnfP21237 Gm19163-201ENSMUST00000223313 780 ntBASIC11.83□□□□□ -0.52
BdnfP21237 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
BdnfP21237 Gm6091-201ENSMUST00000098307 165 ntBASIC11.83□□□□□ -0.52
BdnfP21237 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.83□□□□□ -0.52
BdnfP21237 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.83□□□□□ -0.52
BdnfP21237 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.83□□□□□ -0.52
BdnfP21237 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.83□□□□□ -0.52
BdnfP21237 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.83□□□□□ -0.52
BdnfP21237 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.83□□□□□ -0.52
BdnfP21237 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BdnfP21237 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.82□□□□□ -0.52
BdnfP21237 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.82□□□□□ -0.52
BdnfP21237 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
BdnfP21237 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
BdnfP21237 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
BdnfP21237 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms