Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccl3P10855 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.84□□□□□ -0.67
Ccl3P10855 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccl3P10855 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Ccl3P10855 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.84□□□□□ -0.67
Ccl3P10855 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.84□□□□□ -0.67
Ccl3P10855 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Ccl3P10855 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.84□□□□□ -0.67
Ccl3P10855 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccl3P10855 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.84□□□□□ -0.67
Ccl3P10855 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.84□□□□□ -0.67
Ccl3P10855 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Gm5705-201ENSMUST00000066241 711 ntBASIC10.84□□□□□ -0.67
Ccl3P10855 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.84□□□□□ -0.67
Ccl3P10855 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ccl3P10855 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ccl3P10855 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl3P10855 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ccl3P10855 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccl3P10855 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.83□□□□□ -0.68
Ccl3P10855 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ccl3P10855 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Gm11956-201ENSMUST00000119525 512 ntBASIC10.83□□□□□ -0.68
Ccl3P10855 Gm15595-201ENSMUST00000120840 961 ntBASIC10.83□□□□□ -0.68
Ccl3P10855 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.83□□□□□ -0.68
Ccl3P10855 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.83□□□□□ -0.68
Ccl3P10855 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ccl3P10855 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.83□□□□□ -0.68
Ccl3P10855 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.83□□□□□ -0.68
Ccl3P10855 Gm45575-201ENSMUST00000210283 548 ntBASIC10.83□□□□□ -0.68
Ccl3P10855 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.83□□□□□ -0.68
Ccl3P10855 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccl3P10855 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccl3P10855 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl3P10855 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Ccl3P10855 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms