Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Gm8227-201ENSMUST00000223306 571 ntBASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Morn2-202ENSMUST00000227729 656 ntBASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Gm14723-201ENSMUST00000118686 215 ntBASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Gm13342-201ENSMUST00000121055 207 ntBASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Gm44364-201ENSMUST00000198368 141 ntBASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Chmp6P0C0A3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm13875-201ENSMUST00000120162 282 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm8018-201ENSMUST00000173536 789 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gm6621-201ENSMUST00000193251 772 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Cts7-204ENSMUST00000225321 1257 ntBASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp6P0C0A3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms