Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Gm2517-201ENSMUST00000215651 348 ntBASIC13.03□□□□□ -0.32
Hoxc8P09025 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.03□□□□□ -0.32
Hoxc8P09025 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.03□□□□□ -0.32
Hoxc8P09025 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc8P09025 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc8P09025 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.02□□□□□ -0.32
Hoxc8P09025 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Hoxc8P09025 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.02□□□□□ -0.32
Hoxc8P09025 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc8P09025 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Hoxc8P09025 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc8P09025 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc8P09025 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc8P09025 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hoxc8P09025 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Hoxc8P09025 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc8P09025 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Hoxc8P09025 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm37458-201ENSMUST00000194055 410 ntBASIC13.02□□□□□ -0.33
Hoxc8P09025 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm2553-201ENSMUST00000215986 605 ntBASIC13.02□□□□□ -0.33
Hoxc8P09025 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.02□□□□□ -0.33
Hoxc8P09025 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc8P09025 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.01□□□□□ -0.33
Hoxc8P09025 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.01□□□□□ -0.33
Hoxc8P09025 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Gm9358-201ENSMUST00000183067 927 ntBASIC13.01□□□□□ -0.33
Hoxc8P09025 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Gm37905-201ENSMUST00000195310 341 ntBASIC13.01□□□□□ -0.33
Hoxc8P09025 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms