Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
PdgfrbP05622 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
PdgfrbP05622 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm16107-201ENSMUST00000162523 862 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm37293-201ENSMUST00000191658 295 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm37489-201ENSMUST00000191883 159 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.47□□□□□ -0.41
PdgfrbP05622 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm44958-201ENSMUST00000203734 736 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm6013-201ENSMUST00000212264 699 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm18935-201ENSMUST00000212692 664 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm7046-201ENSMUST00000221351 977 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Morn2-202ENSMUST00000227729 656 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.47□□□□□ -0.41
PdgfrbP05622 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
PdgfrbP05622 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PdgfrbP05622 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.46□□□□□ -0.41
PdgfrbP05622 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.46□□□□□ -0.41
PdgfrbP05622 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm11531-201ENSMUST00000117614 555 ntBASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm27501-201ENSMUST00000183599 107 ntBASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.46□□□□□ -0.41
PdgfrbP05622 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.46□□□□□ -0.41
PdgfrbP05622 AC106830.1-201ENSMUST00000228032 1003 ntBASIC12.46□□□□□ -0.41
PdgfrbP05622 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PdgfrbP05622 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.46□□□□□ -0.41
PdgfrbP05622 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PdgfrbP05622 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
PdgfrbP05622 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
PdgfrbP05622 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PdgfrbP05622 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdgfrbP05622 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdgfrbP05622 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms