Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn4O89029 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn4O89029 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn4O89029 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn4O89029 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn4O89029 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn4O89029 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.6□□□□□ -0.55
Matn4O89029 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.6□□□□□ -0.55
Matn4O89029 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Gm24830-201ENSMUST00000102024 166 ntBASIC11.6□□□□□ -0.55
Matn4O89029 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.6□□□□□ -0.55
Matn4O89029 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.6□□□□□ -0.55
Matn4O89029 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.6□□□□□ -0.55
Matn4O89029 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.6□□□□□ -0.55
Matn4O89029 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.6□□□□□ -0.55
Matn4O89029 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.6□□□□□ -0.55
Matn4O89029 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Gm26232-201ENSMUST00000083360 166 ntBASIC11.6□□□□□ -0.55
Matn4O89029 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.6□□□□□ -0.55
Matn4O89029 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn4O89029 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.6□□□□□ -0.55
Matn4O89029 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.59□□□□□ -0.55
Matn4O89029 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Matn4O89029 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Matn4O89029 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.59□□□□□ -0.55
Matn4O89029 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Gm13736-201ENSMUST00000119272 253 ntBASIC11.59□□□□□ -0.55
Matn4O89029 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Matn4O89029 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Matn4O89029 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.59□□□□□ -0.55
Matn4O89029 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.59□□□□□ -0.55
Matn4O89029 Gm9002-201ENSMUST00000178437 499 ntBASIC11.59□□□□□ -0.55
Matn4O89029 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Gm44405-201ENSMUST00000198952 126 ntBASIC11.59□□□□□ -0.55
Matn4O89029 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Gm7561-201ENSMUST00000211203 886 ntBASIC11.59□□□□□ -0.55
Matn4O89029 Gm45925-201ENSMUST00000218882 744 ntBASIC11.59□□□□□ -0.55
Matn4O89029 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.59□□□□□ -0.55
Matn4O89029 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.59□□□□□ -0.55
Matn4O89029 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.59□□□□□ -0.55
Matn4O89029 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Matn4O89029 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.59□□□□□ -0.55
Matn4O89029 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.59□□□□□ -0.55
Matn4O89029 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn4O89029 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Matn4O89029 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Matn4O89029 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.58□□□□□ -0.55
Matn4O89029 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Matn4O89029 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms