Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm43520-201ENSMUST00000197996 164 ntBASIC12.7□□□□□ -0.38
Syn1O88935 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.7□□□□□ -0.38
Syn1O88935 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.7□□□□□ -0.38
Syn1O88935 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Syn1O88935 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Syn1O88935 Matn2-206ENSMUST00000228570 2798 ntBASIC12.7□□□□□ -0.38
Syn1O88935 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Syn1O88935 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Syn1O88935 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Syn1O88935 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Syn1O88935 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Gm16071-201ENSMUST00000119589 793 ntBASIC12.69□□□□□ -0.38
Syn1O88935 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Gm25604-201ENSMUST00000158359 133 ntBASIC12.69□□□□□ -0.38
Syn1O88935 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Syn1O88935 Gm17826-201ENSMUST00000189720 798 ntBASIC12.69□□□□□ -0.38
Syn1O88935 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.69□□□□□ -0.38
Syn1O88935 Gm2965-201ENSMUST00000198365 343 ntBASIC12.69□□□□□ -0.38
Syn1O88935 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Syn1O88935 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.69□□□□□ -0.38
Syn1O88935 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syn1O88935 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Syn1O88935 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.68□□□□□ -0.38
Syn1O88935 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Syn1O88935 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
Syn1O88935 Gm14724-201ENSMUST00000118400 537 ntBASIC12.68□□□□□ -0.38
Syn1O88935 Gm15036-201ENSMUST00000118880 400 ntBASIC12.68□□□□□ -0.38
Syn1O88935 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.68□□□□□ -0.38
Syn1O88935 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.68□□□□□ -0.38
Syn1O88935 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.68□□□□□ -0.38
Syn1O88935 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Syn1O88935 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Syn1O88935 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Syn1O88935 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Syn1O88935 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Syn1O88935 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Syn1O88935 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.67□□□□□ -0.38
Syn1O88935 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms