Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cops4O88544 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.36□□□□□ -0.59
Cops4O88544 Gm2495-201ENSMUST00000191160 466 ntBASIC11.36□□□□□ -0.59
Cops4O88544 Gm38671-201ENSMUST00000200573 130 ntBASIC11.36□□□□□ -0.59
Cops4O88544 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cops4O88544 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cops4O88544 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cops4O88544 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.36□□□□□ -0.59
Cops4O88544 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cops4O88544 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cops4O88544 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.36□□□□□ -0.59
Cops4O88544 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cops4O88544 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.36□□□□□ -0.59
Cops4O88544 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cops4O88544 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cops4O88544 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.36□□□□□ -0.59
Cops4O88544 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cops4O88544 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.36□□□□□ -0.59
Cops4O88544 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cops4O88544 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.36□□□□□ -0.59
Cops4O88544 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.35□□□□□ -0.59
Cops4O88544 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Cops4O88544 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.35□□□□□ -0.59
Cops4O88544 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.35□□□□□ -0.59
Cops4O88544 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.35□□□□□ -0.59
Cops4O88544 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Gm27701-201ENSMUST00000184498 110 ntBASIC11.35□□□□□ -0.59
Cops4O88544 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.35□□□□□ -0.59
Cops4O88544 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.35□□□□□ -0.59
Cops4O88544 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.35□□□□□ -0.59
Cops4O88544 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.35□□□□□ -0.59
Cops4O88544 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Cops4O88544 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cops4O88544 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.35□□□□□ -0.59
Cops4O88544 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cops4O88544 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.34□□□□□ -0.59
Cops4O88544 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Cops4O88544 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cops4O88544 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.34□□□□□ -0.59
Cops4O88544 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.34□□□□□ -0.59
Cops4O88544 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.34□□□□□ -0.59
Cops4O88544 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cops4O88544 Gm28911-201ENSMUST00000188837 117 ntBASIC11.34□□□□□ -0.59
Cops4O88544 Gm28693-202ENSMUST00000190758 331 ntBASIC11.34□□□□□ -0.59
Cops4O88544 Gm8515-201ENSMUST00000194852 576 ntBASIC11.34□□□□□ -0.59
Cops4O88544 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.34□□□□□ -0.59
Cops4O88544 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.34□□□□□ -0.59
Cops4O88544 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.34□□□□□ -0.59
Cops4O88544 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.34□□□□□ -0.59
Cops4O88544 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms