Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Efnb3O35393 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Efnb3O35393 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Efnb3O35393 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.74□□□□□ -0.85
Efnb3O35393 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
Efnb3O35393 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.74□□□□□ -0.85
Efnb3O35393 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Efnb3O35393 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Efnb3O35393 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
Efnb3O35393 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Efnb3O35393 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
Efnb3O35393 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Efnb3O35393 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Efnb3O35393 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.73□□□□□ -0.85
Efnb3O35393 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.73□□□□□ -0.85
Efnb3O35393 Gm15806-201ENSMUST00000120696 955 ntBASIC9.73□□□□□ -0.85
Efnb3O35393 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Efnb3O35393 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Gm2495-201ENSMUST00000191160 466 ntBASIC9.73□□□□□ -0.85
Efnb3O35393 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.73□□□□□ -0.85
Efnb3O35393 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.73□□□□□ -0.85
Efnb3O35393 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Gm17794-201ENSMUST00000220252 955 ntBASIC9.73□□□□□ -0.85
Efnb3O35393 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.73□□□□□ -0.85
Efnb3O35393 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.73□□□□□ -0.85
Efnb3O35393 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.73□□□□□ -0.85
Efnb3O35393 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.73□□□□□ -0.85
Efnb3O35393 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Efnb3O35393 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.72□□□□□ -0.85
Efnb3O35393 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.72□□□□□ -0.85
Efnb3O35393 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.72□□□□□ -0.85
Efnb3O35393 Gm16296-201ENSMUST00000159905 325 ntBASIC9.72□□□□□ -0.85
Efnb3O35393 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Efnb3O35393 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.72□□□□□ -0.85
Efnb3O35393 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm8463-201ENSMUST00000208573 613 ntBASIC9.72□□□□□ -0.85
Efnb3O35393 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.72□□□□□ -0.85
Efnb3O35393 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Efnb3O35393 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms