Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm26047-202ENSMUST00000198840 115 ntBASIC18.58■□□□□ 0.57
Polr1aO35134 Ap3s1-202ENSMUST00000224622 978 ntBASIC18.58■□□□□ 0.57
Polr1aO35134 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr1aO35134 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr1aO35134 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr1aO35134 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr1aO35134 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr1aO35134 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr1aO35134 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Polr1aO35134 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr1aO35134 Gm25063-201ENSMUST00000104666 94 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC18.57■□□□□ 0.56
Polr1aO35134 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC18.57■□□□□ 0.56
Polr1aO35134 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Gm26134-201ENSMUST00000178484 110 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC18.57■□□□□ 0.56
Polr1aO35134 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Polr1aO35134 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Gm13347-201ENSMUST00000120298 1353 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 Gm28323-201ENSMUST00000186817 2499 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 Gm21358-201ENSMUST00000191645 1659 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Polr1aO35134 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC18.57■□□□□ 0.56
Polr1aO35134 Gm13600-201ENSMUST00000117949 744 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 Gm19015-201ENSMUST00000184002 1189 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC18.57■□□□□ 0.56
Polr1aO35134 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC18.57■□□□□ 0.56
Polr1aO35134 AC154184.3-201ENSMUST00000225620 1090 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 AC154176.1-201ENSMUST00000225897 220 ntBASIC18.57■□□□□ 0.56
Polr1aO35134 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Polr1aO35134 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Polr1aO35134 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.56■□□□□ 0.56
Polr1aO35134 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC18.56■□□□□ 0.56
Polr1aO35134 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Polr1aO35134 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Polr1aO35134 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Polr1aO35134 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC18.56■□□□□ 0.56
Polr1aO35134 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Gm9116-201ENSMUST00000192400 1018 ntBASIC18.56■□□□□ 0.56
Polr1aO35134 AC165154.1-201ENSMUST00000226661 340 ntBASIC18.56■□□□□ 0.56
Polr1aO35134 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Polr1aO35134 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.56■□□□□ 0.56
Polr1aO35134 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Polr1aO35134 Gm7278-201ENSMUST00000119836 1401 ntBASIC18.56■□□□□ 0.56
Polr1aO35134 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 AC093022.4-203ENSMUST00000228523 2657 ntBASIC18.56■□□□□ 0.56
Polr1aO35134 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Polr1aO35134 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr1aO35134 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC18.55■□□□□ 0.56
Polr1aO35134 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Polr1aO35134 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Polr1aO35134 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
Polr1aO35134 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Polr1aO35134 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC18.55■□□□□ 0.56
Polr1aO35134 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Polr1aO35134 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Gm3726-201ENSMUST00000203110 785 ntBASIC18.55■□□□□ 0.56
Polr1aO35134 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Polr1aO35134 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms