Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11□□□□□ -0.65
Raet1cO08604 Gm10076-201ENSMUST00000073238 384 ntBASIC11□□□□□ -0.65
Raet1cO08604 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Raet1cO08604 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Raet1cO08604 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Raet1cO08604 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Raet1cO08604 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.99□□□□□ -0.65
Raet1cO08604 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Raet1cO08604 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Raet1cO08604 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Gm10434-201ENSMUST00000101158 471 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.99□□□□□ -0.65
Raet1cO08604 Gm14127-201ENSMUST00000117906 678 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Gm12058-201ENSMUST00000118614 437 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Gm9083-201ENSMUST00000120423 819 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Gm23119-201ENSMUST00000158610 140 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Raet1cO08604 Gm27023-201ENSMUST00000182372 285 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Mir7085-201ENSMUST00000184353 66 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Gm37201-201ENSMUST00000191845 523 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Gm38158-201ENSMUST00000194617 339 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.99□□□□□ -0.65
Raet1cO08604 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.99□□□□□ -0.65
Raet1cO08604 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Gm19309-201ENSMUST00000218295 205 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Raet1cO08604 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Raet1cO08604 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Raet1cO08604 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.99□□□□□ -0.65
Raet1cO08604 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.99□□□□□ -0.65
Raet1cO08604 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Raet1cO08604 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Raet1cO08604 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Raet1cO08604 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Gm13875-201ENSMUST00000120162 282 ntBASIC10.98□□□□□ -0.65
Raet1cO08604 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.98□□□□□ -0.65
Raet1cO08604 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Raet1cO08604 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.98□□□□□ -0.65
Raet1cO08604 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Raet1cO08604 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms