Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Gm44506-201ENSMUST00000206278 965 ntBASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
B020004C17RikJ3QP07 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Gm11836-201ENSMUST00000121022 441 ntBASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Gm13182-201ENSMUST00000122241 312 ntBASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Gm2875-201ENSMUST00000211333 360 ntBASIC13.68□□□□□ -0.22
B020004C17RikJ3QP07 Gm18041-201ENSMUST00000218210 618 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms