Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Gm25287-201ENSMUST00000103846 110 ntBASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Gm22918-201ENSMUST00000103855 110 ntBASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Gm24158-201ENSMUST00000175263 71 ntBASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Gm21470-201ENSMUST00000187680 696 ntBASIC12.64□□□□□ -0.39
Trim55G3X8Y1 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Gm6912-201ENSMUST00000117218 544 ntBASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Gm9630-201ENSMUST00000178304 885 ntBASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Gm27321-201ENSMUST00000185021 205 ntBASIC12.63□□□□□ -0.39
Trim55G3X8Y1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trim55G3X8Y1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Gm33320-201ENSMUST00000192232 530 ntBASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Gm42599-201ENSMUST00000201308 469 ntBASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms