Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh9F8VPK8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Gm7809-201ENSMUST00000153199 742 ntBASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Gm6222-202ENSMUST00000182143 629 ntBASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Gm39404-201ENSMUST00000216350 313 ntBASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Gm10076-201ENSMUST00000073238 384 ntBASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh9F8VPK8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm25927-201ENSMUST00000175058 117 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm5781-201ENSMUST00000219792 443 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm25857-201ENSMUST00000082788 129 ntBASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh9F8VPK8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms