Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm807-202ENSMUST00000224929 408 ntBASIC11.34□□□□□ -0.59
TprF6ZDS4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.34□□□□□ -0.59
TprF6ZDS4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm13549-201ENSMUST00000118339 796 ntBASIC11.34□□□□□ -0.59
TprF6ZDS4 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm43962-201ENSMUST00000203898 190 ntBASIC11.34□□□□□ -0.59
TprF6ZDS4 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TprF6ZDS4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.34□□□□□ -0.59
TprF6ZDS4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TprF6ZDS4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.33□□□□□ -0.6
TprF6ZDS4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TprF6ZDS4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TprF6ZDS4 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.33□□□□□ -0.6
TprF6ZDS4 Gm3619-201ENSMUST00000219947 775 ntBASIC11.33□□□□□ -0.6
TprF6ZDS4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TprF6ZDS4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TprF6ZDS4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TprF6ZDS4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms