Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Gm19459-201ENSMUST00000176240 835 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Mir7686-201ENSMUST00000200604 57 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 Gm43916-201ENSMUST00000205062 967 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.72□□□□□ -0.05
Ube4aE9Q735 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Gm10179-201ENSMUST00000086233 688 ntBASIC14.72□□□□□ -0.05
Ube4aE9Q735 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ube4aE9Q735 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.71□□□□□ -0.05
Ube4aE9Q735 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gm17391-201ENSMUST00000171036 126 ntBASIC14.71□□□□□ -0.05
Ube4aE9Q735 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gm5706-201ENSMUST00000181525 993 ntBASIC14.71□□□□□ -0.05
Ube4aE9Q735 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.71□□□□□ -0.05
Ube4aE9Q735 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms