Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Gm11439-201ENSMUST00000118598 409 ntBASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb9E9Q5G2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Gm27341-201ENSMUST00000183570 106 ntBASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 AY036118-201ENSMUST00000200021 923 ntBASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Gm8385-201ENSMUST00000058999 643 ntBASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Pcdhb9E9Q5G2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm14028-201ENSMUST00000117434 479 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm29615-201ENSMUST00000185371 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm28224-201ENSMUST00000186078 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm29001-201ENSMUST00000186177 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm28292-201ENSMUST00000186593 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm28101-201ENSMUST00000187608 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm29076-201ENSMUST00000187689 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm28302-201ENSMUST00000187931 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm28646-201ENSMUST00000188220 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm28205-201ENSMUST00000189177 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm29032-201ENSMUST00000189797 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm28695-201ENSMUST00000190300 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm37448-201ENSMUST00000192795 697 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm43962-201ENSMUST00000203898 190 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm4607-201ENSMUST00000206649 577 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.43□□□□□ -0.1
Pcdhb9E9Q5G2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms