Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Mir6387-201ENSMUST00000184042 108 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm6108-201ENSMUST00000208365 367 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Elobl-202ENSMUST00000082339 300 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm38348-201ENSMUST00000191718 2273 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm15636-201ENSMUST00000119205 668 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm17782-201ENSMUST00000174345 880 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm44917-201ENSMUST00000208798 520 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Gm7525-201ENSMUST00000219425 454 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 AC163646.3-201ENSMUST00000228879 772 ntBASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a3E9PWQ3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm8459-201ENSMUST00000162504 760 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm15570-201ENSMUST00000122093 625 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm29689-201ENSMUST00000221076 589 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Gm5194-201ENSMUST00000221457 742 ntBASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a3E9PWQ3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Col6a3E9PWQ3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a3E9PWQ3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a3E9PWQ3 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.9□□□□□ -0.51
Col6a3E9PWQ3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Gm16547-201ENSMUST00000159474 293 ntBASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Zfp389-202ENSMUST00000224437 1234 ntBASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Gm28180-201ENSMUST00000189608 722 ntBASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms